User contributions for Sulc

10 March 2014

• 19:0819:08, 10 March 2014 diff hist +4‎ RNA model ‎No edit summary
• 19:0719:07, 10 March 2014 diff hist −24‎ RNA model ‎No edit summary
• 19:0619:06, 10 March 2014 diff hist +3‎ RNA model ‎No edit summary
• 19:0519:05, 10 March 2014 diff hist −1‎ RNA model ‎No edit summary
• 19:0419:04, 10 March 2014 diff hist −14‎ RNA model ‎No edit summary
• 19:0419:04, 10 March 2014 diff hist +1‎ RNA model ‎No edit summary
• 19:0219:02, 10 March 2014 diff hist +59‎ RNA model ‎No edit summary
• 19:0019:00, 10 March 2014 diff hist +40‎ RNA model ‎No edit summary
• 18:5818:58, 10 March 2014 diff hist +1,806‎ RNA model ‎No edit summary
• 17:4017:40, 10 March 2014 diff hist −19‎ RNA model ‎No edit summary
• 17:3817:38, 10 March 2014 diff hist +1,818‎ RNA model ‎No edit summary
• 13:2413:24, 10 March 2014 diff hist +27‎ RNA model ‎No edit summary

9 March 2014

• 16:4616:46, 9 March 2014 diff hist +1‎ RNA duplex melting ‎No edit summary
• 16:4616:46, 9 March 2014 diff hist +22‎ RNA duplex melting ‎No edit summary
• 16:4216:42, 9 March 2014 diff hist +948‎ N RNA duplex melting ‎ Created page with "==Introduction== This example shows how our code can be used to calculate melting temperature of an RNA duplex (8-mer) using the Virtual Move Monte Carlo (VMMC) algorithm. The c…"

6 March 2014

• 18:0918:09, 6 March 2014 diff hist −1‎ RNA model ‎No edit summary
• 18:0818:08, 6 March 2014 diff hist +2,000‎ N RNA model ‎ Created page with "The RNA model, oxRNA, treats each RNA nucleotide as a single rigid body with multiple interaction sites, following the coarse-graining apporach adopted for the DNA model. The nu…"
• 18:0318:03, 6 March 2014 diff hist +59‎ N File:Image duplex combined annotated.png ‎ A schematic illustration of interactions in the oxRNA model current

20 January 2014

• 12:5712:57, 20 January 2014 diff hist +331‎ Publications ‎No edit summary

13 November 2013

• 16:2216:22, 13 November 2013 diff hist +101‎ Publications ‎No edit summary

19 October 2013

• 14:0014:00, 19 October 2013 diff hist +12‎ Main Page ‎No edit summary
• 13:5713:57, 19 October 2013 diff hist +1‎ Main Page ‎No edit summary
• 13:5713:57, 19 October 2013 diff hist +13‎ Main Page ‎No edit summary
• 13:5613:56, 19 October 2013 diff hist +6‎ Main Page ‎No edit summary
• 13:5413:54, 19 October 2013 diff hist +80‎ Main Page ‎No edit summary

9 September 2013

• 17:1017:10, 9 September 2013 diff hist +332‎ Publications ‎No edit summary

2 September 2013

• 22:0622:06, 2 September 2013 diff hist +2‎ Publications ‎No edit summary
• 22:0522:05, 2 September 2013 diff hist +83‎ Publications ‎No edit summary

22 August 2013

• 22:3422:34, 22 August 2013 diff hist +13‎ Publications ‎No edit summary
• 22:3322:33, 22 August 2013 diff hist +249‎ Publications ‎No edit summary
• 22:3022:30, 22 August 2013 diff hist +86‎ Publications ‎No edit summary

19 July 2013

• 05:2705:27, 19 July 2013 diff hist −41‎ Features of the previous version ‎ →‎Experimental (Unsupported) features

5 April 2013

• 13:0713:07, 5 April 2013 diff hist −36‎ Contact information ‎No edit summary
• 13:0613:06, 5 April 2013 diff hist +36‎ Contact information ‎No edit summary
• 13:0413:04, 5 April 2013 diff hist −26‎ Contact information ‎No edit summary
• 13:0413:04, 5 April 2013 diff hist −5‎ Contact information ‎No edit summary
• 13:0313:03, 5 April 2013 diff hist +31‎ Contact information ‎No edit summary

15 March 2013

• 13:3313:33, 15 March 2013 diff hist +204‎ Publications ‎No edit summary

5 March 2013

• 13:1613:16, 5 March 2013 diff hist +4‎ Documentation ‎ →‎pdb format

20 December 2012

• 12:1612:16, 20 December 2012 diff hist 2,245 bytes Publications ‎No edit summary

12 December 2012

• 14:5314:53, 12 December 2012 diff hist 24,357 bytes Documentation ‎ →‎String
• 14:5214:52, 12 December 2012 diff hist 24,359 bytes Documentation ‎ →‎Repulsion plane
• 14:5114:51, 12 December 2012 diff hist 24,358 bytes Documentation ‎ →‎Repulsion plane

2 October 2012

• 10:5310:53, 2 October 2012 diff hist 3,768 bytes Model introduction ‎No edit summary
• 10:5210:52, 2 October 2012 diff hist 3,653 bytes Model introduction ‎No edit summary

11 September 2012

• 19:0919:09, 11 September 2012 diff hist 1,746 bytes Main Page ‎ →‎Acknowledgments

7 September 2012

• 00:0600:06, 7 September 2012 diff hist 24,441 bytes Documentation ‎ →‎Generation of initial configurations
• 00:0600:06, 7 September 2012 diff hist 24,445 bytes Documentation ‎ →‎Generation of initial configurations

23 July 2012

• 18:3518:35, 23 July 2012 diff hist 3,739 bytes Model introduction ‎No edit summary
• 18:3418:34, 23 July 2012 diff hist 3,546 bytes Model introduction ‎No edit summary

18 July 2012

• 04:5404:54, 18 July 2012 diff hist 1,730 bytes Publications ‎No edit summary
• 04:5304:53, 18 July 2012 diff hist 1,873 bytes License and Copyright ‎ →‎Referencing

27 June 2012

• 17:1117:11, 27 June 2012 diff hist 3,558 bytes Model introduction ‎No edit summary
• 16:4716:47, 27 June 2012 diff hist 3,557 bytes Model introduction ‎No edit summary
• 16:4616:46, 27 June 2012 diff hist 3,510 bytes Model introduction ‎No edit summary

25 April 2012

• 15:0515:05, 25 April 2012 diff hist 2,782 bytes Features of the previous version ‎No edit summary

23 April 2012

• 18:1618:16, 23 April 2012 diff hist empty File:Hairpin kiss2.png ‎No edit summary current
• 18:1518:15, 23 April 2012 diff hist 855 bytes Screenshots and movies ‎ →‎Kissing hairpin
• 18:1418:14, 23 April 2012 diff hist empty File:Hairpin kiss.png ‎No edit summary current
• 18:0718:07, 23 April 2012 diff hist 854 bytes Screenshots and movies ‎No edit summary
• 17:5917:59, 23 April 2012 diff hist 24,402 bytes Documentation ‎ →‎Repulsion plane
• 17:5817:58, 23 April 2012 diff hist 24,399 bytes Documentation ‎ →‎Repulsion plane

19 April 2012

• 20:3720:37, 19 April 2012 diff hist 2,318 bytes Download and Installation ‎ →‎Installation

18 April 2012

• 16:4016:40, 18 April 2012 diff hist 723 bytes Contact information ‎No edit summary
• 15:5215:52, 18 April 2012 diff hist 709 bytes Contact information ‎No edit summary
• 15:4915:49, 18 April 2012 diff hist 694 bytes Contact information ‎No edit summary
• 15:2315:23, 18 April 2012 diff hist 699 bytes Contact information ‎No edit summary
• 15:2015:20, 18 April 2012 diff hist 689 bytes Contact information ‎ New page: The authors of the code can be contacted at the following adresses: Thomas Ouldridge: t(dot)ouldridge1(at)physics(dot)ox(dot)ac(dot)uk Petr Šulc: p(dot)sulc1(at)physics(dot)ox(dot)ac(dot...
• 15:0615:06, 18 April 2012 diff hist 1,683 bytes Main Page ‎No edit summary
• 02:5302:53, 18 April 2012 diff hist 24,208 bytes Documentation ‎ →‎Repulsion plane
• 02:5302:53, 18 April 2012 diff hist 24,207 bytes Documentation ‎ →‎Repulsion plane
• 02:4302:43, 18 April 2012 diff hist 23,988 bytes Documentation ‎ →‎Repulsion plane

17 April 2012

• 20:3520:35, 17 April 2012 diff hist 2,182 bytes DsDNA persistence length ‎No edit summary
• 20:3520:35, 17 April 2012 diff hist 2,173 bytes DsDNA persistence length ‎No edit summary
• 20:3420:34, 17 April 2012 diff hist 2,187 bytes DsDNA persistence length ‎No edit summary
• 20:3420:34, 17 April 2012 diff hist 2,257 bytes DsDNA persistence length ‎No edit summary
• 20:3320:33, 17 April 2012 diff hist 2,365 bytes DsDNA persistence length ‎No edit summary
• 20:3220:32, 17 April 2012 diff hist 2,364 bytes DsDNA persistence length ‎No edit summary
• 20:3220:32, 17 April 2012 diff hist 2,362 bytes DsDNA persistence length ‎No edit summary
• 20:1920:19, 17 April 2012 diff hist 1,504 bytes DsDNA persistence length ‎No edit summary
• 20:1820:18, 17 April 2012 diff hist 1,358 bytes m DsDNA persistence length ‎No edit summary
• 20:1720:17, 17 April 2012 diff hist 1,354 bytes DsDNA persistence length ‎No edit summary
• 20:1720:17, 17 April 2012 diff hist 1,351 bytes DsDNA persistence length ‎No edit summary
• 18:5418:54, 17 April 2012 diff hist empty File:Obrazek.png ‎No edit summary current
• 15:3615:36, 17 April 2012 diff hist 1,761 bytes License and Copyright ‎ →‎Referencing

16 April 2012

• 18:4818:48, 16 April 2012 diff hist 1,350 bytes DsDNA persistence length ‎ →‎Persistence length of a double-stranded DNA
• 18:4818:48, 16 April 2012 diff hist 1,353 bytes DsDNA persistence length ‎ →‎Persistence length of a double-stranded DNA
• 18:4318:43, 16 April 2012 diff hist 1,352 bytes DsDNA persistence length ‎ →‎Persistence length of a double-stranded DNA
• 18:4118:41, 16 April 2012 diff hist 1,255 bytes DsDNA persistence length ‎ →‎Persistence length of a double-stranded DNA
• 18:4018:40, 16 April 2012 diff hist 1,256 bytes DsDNA persistence length ‎No edit summary
• 18:3718:37, 16 April 2012 diff hist 1,041 bytes DsDNA persistence length ‎ →‎Petr's example
• 16:4516:45, 16 April 2012 diff hist 802 bytes Screenshots and movies ‎No edit summary
• 16:2016:20, 16 April 2012 diff hist empty File:Interactions.png ‎No edit summary
• 16:1416:14, 16 April 2012 diff hist 839 bytes Screenshots and movies ‎No edit summary
• 16:1316:13, 16 April 2012 diff hist empty File:Duplexik.png ‎No edit summary current
• 16:1016:10, 16 April 2012 diff hist 839 bytes Screenshots and movies ‎No edit summary

14 April 2012

• 01:0901:09, 14 April 2012 diff hist 968 bytes Main Page ‎ →‎oxDNA

13 April 2012

• 20:2120:21, 13 April 2012 diff hist 802 bytes Screenshots and movies ‎ →‎Strand displacement
• 18:1418:14, 13 April 2012 diff hist 571 bytes Screenshots and movies ‎No edit summary
• 18:1318:13, 13 April 2012 diff hist 489 bytes Screenshots and movies ‎No edit summary